Stem-loop dqu-mir-1000

Accession

MI0037534

Description

Dinoponera quadriceps dqu-mir-1000 precursor miRNA

Sequence

gaucggccaucggccggggAUAUUGUCCUGUCACAGCAGUAcgccuuuaaagaguuaCUGGUGUGAUGGGACAUUGUCCucguccuggugcucaccacacgucacacagcuc
...(((((...)))))((((((.((((((((((((.(((((.((((....)).))))))).)))))))))))).))))))(((..((((....)))).)))...........

Structure

----------------gaucggccaucggccg      U            G     c  -  u 
                                gggAUA UGUCCUGUCACA CAGUA gc cu u
                                |||||| |||||||||||| ||||| || ||  
                                uCCUGU ACAGGGUAGUGU GUCau ug ga a
cucgacacacugcacaccacucgugguccugc      U            G     -  a  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature dqu-miR-1000-5p

• Accession: MIMAT0045767
• Description: Dinoponera quadriceps dqu-miR-1000-5p mature miRNA
• Sequence: 20 - AUAUUGUCCUGUCACAGCAGUA - 41
• Evidence: experimental ; Illumina [1]

Mature dqu-miR-1000-3p

• Accession: MIMAT0045768
• Description: Dinoponera quadriceps dqu-miR-1000-3p mature miRNA
• Sequence: 58 - CUGGUGUGAUGGGACAUUGUCC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975