Stem-loop dqu-mir-6039

Accession

MI0037551

Description

Dinoponera quadriceps dqu-mir-6039 precursor miRNA

Sequence

agggaucggcacgaccuggaccguugcucuaGAUCGAACGCGUGAGUUUACGuguggcguucaagugacgUAGACACGCGCGUUGGACCUUaaagcgcgguccuccagcau
.(((.(((...))))))(((((((.(((..((.((.((((((((.((((((((...((......)).)))))))).)))))))).)).))...))))))))))........

Structure

agggaucggcacgaccu       u   -cu  A  G        A        gug  gu 
                 ggaccgu gcu   aG UC AACGCGUG GUUUACGu   gc  u
                 ||||||| |||   || || |||||||| ||||||||   ||   
                 ccuggcg cga   UC AG UUGCGCGC CAGAUgca   ug  c
---------uacgaccu       -   aaU  C  G        A        --g  aa 

Annotation confidence Low

Genome context

Unknown

Mature dqu-miR-6039-5p

• Accession: MIMAT0045799
• Description: Dinoponera quadriceps dqu-miR-6039-5p mature miRNA
• Sequence: 32 - GAUCGAACGCGUGAGUUUACG - 52
• Evidence: experimental ; Illumina [1]

Mature dqu-miR-6039-3p

• Accession: MIMAT0045800
• Description: Dinoponera quadriceps dqu-miR-6039-3p mature miRNA
• Sequence: 71 - UAGACACGCGCGUUGGACCUU - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975