miRBase entry: pca-mir-33

Stem-loop pca-mir-33


Accession
MI0037580
Description
Polistes canadensis pca-mir-33 precursor miRNA


Sequence

uguuucuuuugaaguaugcuuaccuguuacgaguGUGCAUUGUAGUUGCAUUGcgugaaauacaacuaugCAAUACUUCUACAGUGCAACUCcuguggcaggccaaaguacc
..((((....))))..(((((.((((((((((((.((((((((((..(.((((((((.........)))))))).)..))))))))))))))..))))))))...)))))..

Structure
uguuucuuuugaagua     --a        --    G          UU C        aaa 
                ugcuu   ccuguuac  gagu UGCAUUGUAG  G AUUGcgug   u
                |||||   ||||||||  |||| ||||||||||  | ||||||||   a
                augaa   ggacggug  CUCA ACGUGACAUC  C UAACguau   c
--------------cc     acc        uc    -          UU A        caa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature pca-miR-33-5p

Accession MIMAT0045853
Description Polistes canadensis pca-miR-33-5p mature miRNA
Sequence 35 - GUGCAUUGUAGUUGCAUUG - 53
Evidence experimental
Illumina [1]

Mature pca-miR-33-3p

Accession MIMAT0045854
Description Polistes canadensis pca-miR-33-3p mature miRNA
Sequence 71 - CAAUACUUCUACAGUGCAACUC - 92
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26483466
    Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
    "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
    "Proc Natl Acad Sci U S A (2015) 112:13970-13975