Stem-loop pca-mir-316

Accession

MI0037606

Description

Polistes canadensis pca-mir-316 precursor miRNA

Sequence

cgagggugUGUCUUUUUCCGCUUUGCUGCCGcuuaaguagaguucgCCAGCAAAGGGGAACAGGCCGACccuccc
.((((((..((((..((((.(((((((((.((((.....))))..).)))))))).)))).))))..))))))..

Structure

-c      gU    UU    G        - -C    a 
  gagggu  GUCU  UUCC CUUUGCUG C  Gcuu a
  ||||||  ||||  |||| |||||||| |  |||| g
  cuccCA  CGGA  AAGG GAAACGAC g  ugag u
cc      GC    -C    G        C cu    a 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-316-5p

• Accession: MIMAT0045905
• Description: Polistes canadensis pca-miR-316-5p mature miRNA
• Sequence: 9 - UGUCUUUUUCCGCUUUGCUGCCG - 31
• Evidence: experimental ; Illumina [1]

Mature pca-miR-316-3p

• Accession: MIMAT0045906
• Description: Polistes canadensis pca-miR-316-3p mature miRNA
• Sequence: 47 - CCAGCAAAGGGGAACAGGCCGAC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975