Stem-loop pca-mir-980

Accession

MI0037615

Description

Polistes canadensis pca-mir-980 precursor miRNA

Sequence

cacacaaggaaccuguuugaaaucgguuacgcugcggcUCGUCAACGGGCACUUUGcuuuauuaaaaugcUAGCUGCCUUUUGAAGGGCaacaucguauccggugaacc
..............((((...(((((.((((.((..((((.((((.(((((((..((...........)).)).))))).)))).))))..)).)))).))))))))).

Structure

cacacaaggaaccu    gaa     u    c  cg    G    C     -  UU  uuua 
              guuu   aucgg uacg ug  gcUC UCAA GGGCA CU  Gc    u
              ||||   ||||| |||| ||  |||| |||| ||||| ||  ||    u
              caag   uggcc augc ac  CGGG AGUU UCCGU GA  cg    a
-------------c    ---     u    u  aa    A    U     C  -U  uaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-980-5p

• Accession: MIMAT0045923
• Description: Polistes canadensis pca-miR-980-5p mature miRNA
• Sequence: 39 - UCGUCAACGGGCACUUUG - 56
• Evidence: experimental ; Illumina [1]

Mature pca-miR-980-3p

• Accession: MIMAT0045924
• Description: Polistes canadensis pca-miR-980-3p mature miRNA
• Sequence: 71 - UAGCUGCCUUUUGAAGGGC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975