Stem-loop pca-mir-1000

Accession

MI0037618

Description

Polistes canadensis pca-mir-1000 precursor miRNA

Sequence

cauguggaccagugccggggAUAUUGUCCUGUCACAGCAGUacgccuucaaaaaguuacUGGUGUGAUGGGACAUUGUCCucgucucgugguccauucaacgccaccgcc
...(((((((((.(.((((((((.((((((((((((.(((((...(((....))).))))).)))))))))))).)))))))).).).))))))))..............

Structure

-----------cau        - u c        U            G     cgc   c 
              guggacca g g cggggAUA UGUCCUGUCACA CAGUa   cuu a
              |||||||| | | |||||||| |||||||||||| |||||   |||  
              uaccuggu c c gcuCCUGU ACAGGGUAGUGU GUcau   gaa a
ccgccaccgcaacu        g u u        U            G     --u   a 

Annotation confidence Low

Genome context

Unknown

Mature pca-miR-1000-5p

• Accession: MIMAT0045929
• Description: Polistes canadensis pca-miR-1000-5p mature miRNA
• Sequence: 21 - AUAUUGUCCUGUCACAGCAGU - 41
• Evidence: experimental ; Illumina [1]

Mature pca-miR-1000-3p

• Accession: MIMAT0045930
• Description: Polistes canadensis pca-miR-1000-3p mature miRNA
• Sequence: 60 - UGGUGUGAUGGGACAUUGUCC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975