Stem-loop pca-mir-1175

Accession

MI0037619

Description

Polistes canadensis pca-mir-1175 precursor miRNA

Sequence

auaauuuggaagauaacagaaggugucuagguuuAAGUGGAGAAGUGGUCUCUAcgcuuuguuaauuaagUGAGAUUCAACUCCUCCAACUUAUuccugguucuuccuagucgu
.......((((((..(((.....)))(((((..(((((((((.(((.(..(((.(((((........))))))))..).))).)))).)))))..))))).)))))).......

Structure

auaauuu      uaacagaaggugu     uu     -    A   G UC   A     ugu 
       ggaaga             cuagg  uAAGU GGAG AGU G  UCU cgcuu   u
       ||||||             |||||  ||||| |||| ||| |  ||| |||||    
       ccuucu             ggucc  AUUCA CCUC UCA C  AGA GUgaa   a
ugcugau      ------------u     uU     A    C   A UU   -     uua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-1175-5p

• Accession: MIMAT0045931
• Description: Polistes canadensis pca-miR-1175-5p mature miRNA
• Sequence: 35 - AAGUGGAGAAGUGGUCUCUA - 54
• Evidence: experimental ; Illumina [1]

Mature pca-miR-1175-3p

• Accession: MIMAT0045932
• Description: Polistes canadensis pca-miR-1175-3p mature miRNA
• Sequence: 71 - UGAGAUUCAACUCCUCCAACUUAU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975