Stem-loop aae-mir-11902

Accession

MI0037943

Description

Aedes aegypti aae-mir-11902 precursor miRNA

Sequence

182 reads, 88.0 reads per million, 52 experiments

agggcgugacgccaucuacAAGGAGUAUCUGUUCAAGAACUUCAACGAAGCGUUCGGCUUc
.((((..(((((..((.....(((((.(((.....))))))))...)).)))))..)))).

Structure

a    gu     ca  uacAA     A   G 
 gggc  gacgc  uc     GGAGU UCU U
 ||||  |||||  ||     ||||| ||| U
 UUCG  UUGCG  AG     CUUCA AGA C
c    GC     -A  --CAA     -   A 

Annotation confidence Low

Genome context

ref|NW_001811474.1|: 1610978-1611038 [+]

Mature aae-miR-11902-5p

• Accession: MIMAT0057381
• Description: Aedes aegypti aae-miR-11902-5p mature miRNA
• Sequence: 20 - AAGGAGUAUCUGUUCAAGAACUUC - 43
• Evidence: experimental ; Illumina [1]

Mature aae-miR-11902-3p

• Accession: MIMAT0046001
• Description: Aedes aegypti aae-miR-11902-3p mature miRNA
• Sequence: 38 - AACUUCAACGAAGCGUUCGGCUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26914027
   Small RNA Profiling in Dengue Virus 2-Infected Aedes Mosquito Cells Reveals Viral piRNAs and Novel Host miRNAs
   Miesen P, Ivens A, Buck AH, van Rij RP
   PLoS Negl Trop Dis (2016) 10:e0004452