miRBase entry: bta-mir-11974

Stem-loop bta-mir-11974


Accession
MI0038176
Description
Bos taurus bta-mir-11974 precursor miRNA


Sequence

1468 reads, 1.0 reads per million, 178 experiments
ugUGGGGGGCGUGCAGGGGCCGGGgaagcugucaaggacccAGCACCUGCUGUGUCCCCCACAGC
(((((((((((.(((((.((.(((....((....))..))).)).)))))..)))))))))))..

Structure
--           -U     G  C   gaag  g 
  ugUGGGGGGCG  GCAGG GC GGG    cu u
  |||||||||||  ||||| || |||    ||  
  ACACCCCCUGU  CGUCC CG ccc    ga c
CG           GU     A  A   --ag  a 


Annotation confidence High
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Genome context
16: 50520129-50520193 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-11974
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-11974-5p

Accession MIMAT0051099
Description Bos taurus bta-miR-11974-5p mature miRNA
Sequence 3 - UGGGGGGCGUGCAGGGGCCGGG - 24
Evidence experimental
Illumina [1]

Mature bta-miR-11974-3p

Accession MIMAT0046353
Description Bos taurus bta-miR-11974-3p mature miRNA
Sequence 42 - AGCACCUGCUGUGUCCCCCACAGC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129