Stem-loop bta-mir-2285ao-1

Accession

MI0038184

Description

Bos taurus bta-mir-2285ao-1 precursor miRNA

Literature search

11 open access papers mention bta-mir-2285ao-1
(15 sentences)

Sequence

41788 reads, 19.0 reads per million, 308 experiments

aAAAAGUUCGUUCGGGUUUUcuguacccccucaugaAGAAACCCAGACGAACUUUUUGgc
((((((((((((.((((((.((..............)))))))).))))))))))))...

Structure

---            C      U  guaccc 
   aAAAAGUUCGUU GGGUUU cu      c
   |||||||||||| |||||| ||       
   UUUUUCAAGCAG CCCAAA GA      c
cgG            A      -  aguacu 

Annotation confidence Medium

Genome context

2: 115758046-115758105 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-2285ao-1

Mature bta-miR-2285ao-5p

• Accession: MIMAT0051101
• Description: Bos taurus bta-miR-2285ao-5p mature miRNA
• Sequence: 2 - AAAAGUUCGUUCGGGUUUU - 20
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2285ao-3p

• Accession: MIMAT0046360
• Description: Bos taurus bta-miR-2285ao-3p mature miRNA
• Sequence: 37 - AGAAACCCAGACGAACUUUUUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27100870
   Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
   Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
   PLoS One (2016) 11:e0154129