miRBase entry: bta-mir-11978

Stem-loop bta-mir-11978


Accession
MI0038188
Description
Bos taurus bta-mir-11978 precursor miRNA


Sequence

6018 reads, 10.0 reads per million, 160 experiments
ACUCUUCCCUCCCUCGGCCGGCgcucucgcguucggcugcCAGCCGGGACUGGGAGGAAG
..(((((((...((((((.((((((.........))).))).))))))...)))))))..

Structure
AC       UCC      C   -   cuc 
  UCUUCCC   CUCGGC GGC gcu   g
  |||||||   |||||| ||| |||   c
  AGGAGGG   GGGCCG Ccg cgg   g
GA       UCA      A   u   cuu 


Annotation confidence High
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Genome context
2: 31430122-31430181 [-]

Database links

Mature bta-miR-11978-5p

Accession MIMAT0046364
Description Bos taurus bta-miR-11978-5p mature miRNA
Sequence 1 - ACUCUUCCCUCCCUCGGCCGGC - 22
Evidence experimental
Illumina [1]

Mature bta-miR-11978-3p

Accession MIMAT0051103
Description Bos taurus bta-miR-11978-3p mature miRNA
Sequence 41 - CAGCCGGGACUGGGAGGAAG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129