miRBase entry: bta-mir-11980

Stem-loop bta-mir-11980


Accession
MI0038192
Description
Bos taurus bta-mir-11980 precursor miRNA


Sequence

5185 reads, 6.0 reads per million, 222 experiments
AGGCAACGGGCUUGGCGGAGgcuugucccgcucCUCCUUAGCCCGUUCCCUGAGC
(((.((((((((.((.((((..........)))).))..)))))))).)))....

Structure
----   C        -U  C    gcuu 
    AGG AACGGGCU  GG GGAG    g
    ||| ||||||||  || ||||     
    UCC UUGCCCGA  CC Ccuc    u
CGAG   C        UU  U    gccc 


Annotation confidence Medium
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Genome context
25: 40670881-40670935 [-]

Database links

Mature bta-miR-11980-5p

Accession MIMAT0046368
Description Bos taurus bta-miR-11980-5p mature miRNA
Sequence 1 - AGGCAACGGGCUUGGCGGAG - 20
Evidence experimental
Illumina [1]

Mature bta-miR-11980-3p

Accession MIMAT0051107
Description Bos taurus bta-miR-11980-3p mature miRNA
Sequence 34 - CUCCUUAGCCCGUUCCCUGAGC - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27100870
    Comparative Analysis of the miRNome of Bovine Milk Fat, Whey and Cells
    Li R, Dudemaine PL, Zhao X, Lei C, Ibeagha-Awemu EM
    PLoS One (2016) 11:e0154129