Stem-loop xla-mir-100-2

Accession

MI0038226

Description

Xenopus laevis xla-mir-100-2 precursor miRNA

Literature search

2 open access papers mention xla-mir-100-2
(6 sentences)

Sequence

AACCCGUAGAUCCGAACUUGUGcugugccccucucaCAAGCUCGAGUGUGCGGGUCUG
.(((((((.((.(((.((((((..(.......).)))))).))).)).)))))))...

Structure

--A       G  C   A      cu ug 
   ACCCGUA AU CGA CUUGUG  g  c
   ||||||| || ||| ||||||  |  c
   UGGGCGU UG GCU GAACac  c  c
GUC       G  A   C      -u uc 

Annotation confidence Not enough data

Genome context

Sc021711_chrNA: 954-1011 [+]

Mature xla-miR-100-5p

• Accession: MIMAT0046409
• Description: Xenopus laevis xla-miR-100-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-100-2-3p

• Accession: MIMAT0046410
• Description: Xenopus laevis xla-miR-100-2-3p mature miRNA
• Sequence: 37 - CAAGCUCGAGUGUGCGGGUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38