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Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1 |
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|---|---|
| PubMed ID | 26548531 |
| Authors | "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK" |
| Journal | "Dev Biol |
| Volume | 409 |
| Pages | 26-38 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| xla-let-7a | MI0038219 | None | chr7L | 113013226 | 113013292 | - | - |
| xla-let-7b | MI0038220 | None | chr2L | 58268821 | 58268895 | - | - |
| xla-let-7c | MI0038221 | None | chr2S | 9125193 | 9125259 | - | - |
| xla-let-7e | MI0038222 | None | Sc000231_chrNA | 497 | 567 | - | - |
| xla-let-7f | MI0038223 | None | chr8S | 36774930 | 36775001 | - | - |
| xla-let-7j | MI0038224 | None | chr4S | 91074367 | 91074431 | + | - |
| xla-let-7i | MI0038225 | None | chr3S | 89483139 | 89483216 | + | - |
| xla-mir-100-2 | MI0038226 | None | Sc021711_chrNA | 954 | 1011 | + | - |
| xla-mir-100-1 | MI0038227 | None | chr7L | 113015055 | 113015123 | - | - |
| xla-mir-101 | MI0038228 | None | chr1L | 116847300 | 116847358 | - | - |
| xla-mir-103a | MI0038229 | None | chr3S | 108056886 | 108056947 | - | - |
| xla-mir-103b | MI0038230 | None | chr1L | 5131151 | 5131212 | + | - |
| xla-mir-106 | MI0038231 | None | chr8L | 48822350 | 48822405 | - | - |
| xla-mir-107 | MI0038232 | None | chr7S | 24233759 | 24233816 | + | - |
| xla-mir-10a | MI0038233 | None | chr9_10L | 3499313 | 3499374 | - | - |
| xla-mir-10b | MI0038234 | None | chr9_10L | 68713580 | 68713641 | - | - |
| xla-mir-122 | MI0038235 | None | chr1S | 179834556 | 179834613 | - | - |
| xla-mir-124-2 | MI0038236 | None | chr9_10S | 15852383 | 15852442 | + | - |
| xla-mir-124-1 | MI0038237 | None | chr5S | 132473097 | 132473156 | + | - |
| xla-mir-125a | MI0038238 | None | chr7L | 112997294 | 112997352 | - | - |
| xla-mir-125b | MI0038239 | None | chr7S | 56367599 | 56367660 | - | - |
| xla-mir-126-1 | MI0038240 | None | chr8L | 4138429 | 4138488 | + | - |
| xla-mir-126-2 | MI0038241 | None | chr8S | 29261464 | 29261522 | + | - |
| xla-mir-128-2 | MI0038242 | None | chr9_10S | 48857062 | 48857118 | + | - |
| xla-mir-128-1 | MI0038243 | None | chr9_10L | 51878975 | 51879033 | + | - |
| xla-mir-130a | MI0038244 | None | chr2L | 78128936 | 78129002 | + | - |
| xla-mir-130b | MI0038245 | None | chr1S | 133539761 | 133539820 | - | - |
| xla-mir-130c-1 | MI0038246 | None | chr1S | 133547822 | 133547880 | - | - |
| xla-mir-130c-2 | MI0038247 | None | chr1L | 145474487 | 145474545 | - | - |
| xla-mir-135 | MI0038248 | None | chr3L | 36982438 | 36982497 | + | - |
| xla-mir-138-2 | MI0038249 | None | chr6S | 40785528 | 40785589 | + | - |
| xla-mir-138-1 | MI0038250 | None | chr6L | 46038632 | 46038693 | - | - |
| xla-mir-140-1 | MI0038251 | None | chr4L | 49530897 | 49530959 | - | - |
| xla-mir-140-2 | MI0038252 | None | Sc000039_chrNA | 150696 | 150758 | - | - |
| xla-mir-142-2 | MI0038253 | None | chr2S | 31372004 | 31372063 | + | - |
| xla-mir-143 | MI0038254 | None | chr3L | 26674090 | 26674144 | - | - |
| xla-mir-144 | MI0038255 | None | chr2S | 4306708 | 4306765 | - | - |
| xla-mir-145 | MI0038256 | None | chr3L | 26673145 | 26673201 | - | - |
| xla-mir-146a | MI0038257 | None | chr3L | 4894402 | 4894457 | - | - |
| xla-mir-146b | MI0038258 | None | chr1S | 4507173 | 4507235 | - | - |
| xla-mir-148a | MI0038259 | None | chr6L | 36438750 | 36438811 | - | - |
| xla-mir-148b | MI0038260 | None | chr2L | 132006903 | 132006965 | - | - |
| xla-mir-15a | MI0038261 | None | chr2S | 118680467 | 118680525 | - | - |
| xla-mir-15b | MI0038262 | None | chr5S | 96781648 | 96781705 | - | - |
| xla-mir-15c-2 | MI0038263 | None | chr8S | 74387911 | 74387968 | - | - |
| xla-mir-16b | MI0038264 | None | chr5L | 113026888 | 113026947 | - | - |
| xla-mir-16a | MI0038265 | None | chr5S | 96781497 | 96781556 | - | - |
| xla-mir-16c | MI0038266 | None | chr8S | 74386415 | 74386480 | - | - |
| xla-mir-17-1 | MI0038267 | None | chr2S | 91488970 | 91489030 | - | - |
| xla-mir-17-2 | MI0038268 | None | chr2L | 107332477 | 107332538 | - | - |
| xla-mir-181a | MI0038269 | None | chr4S | 74639795 | 74639856 | - | - |
| xla-mir-181b-1 | MI0038270 | None | chr4S | 74638986 | 74639047 | - | - |
| xla-mir-181b-2 | MI0038271 | None | chr8L | 9166880 | 9166939 | - | - |
| xla-mir-182-1 | MI0038272 | None | chr3S | 59897286 | 59897350 | - | - |
| xla-mir-182-2 | MI0038273 | None | chr3L | 71343446 | 71343509 | + | - |
| xla-mir-183 | MI0038274 | None | chr3S | 59902034 | 59902095 | - | - |
| xla-mir-184 | MI0038275 | None | chr3S | 31756349 | 31756412 | - | - |
| xla-mir-18b | MI0038276 | None | chr2S | 91488841 | 91488903 | - | - |
| xla-mir-18a-2 | MI0038277 | None | chr8S | 74307995 | 74308056 | - | - |
| xla-mir-190 | MI0038278 | None | chr8L | 118111063 | 118111121 | - | - |
| xla-mir-191 | MI0038279 | None | chr4S | 99615962 | 99616021 | - | - |
| xla-mir-192 | MI0038280 | None | chr4L | 21828334 | 21828394 | + | - |
| xla-mir-193 | MI0038281 | None | chr9_10S | 82414612 | 82414670 | - | - |
| xla-mir-194-2 | MI0038282 | None | chr4L | 21825288 | 21825346 | + | - |
| xla-mir-199 | MI0038283 | None | chr4S | 70698475 | 70698536 | + | - |
| xla-mir-19a | MI0038284 | None | chr2L | 107332210 | 107332271 | - | - |
| xla-mir-19b-2 | MI0038285 | None | chr2S | 91488415 | 91488476 | - | - |
| xla-mir-1a | MI0038286 | None | chr6L | 77386282 | 77386342 | - | - |
| xla-mir-200a-1 | MI0038287 | None | chr7S | 64723192 | 64723252 | - | - |
| xla-mir-200a-2 | MI0038288 | None | chr7L | 78951028 | 78951089 | - | - |
| xla-mir-200b | MI0038289 | None | chr7S | 64724919 | 64724978 | - | - |
| xla-mir-202 | MI0038290 | None | chr7S | 16808075 | 16808131 | + | - |
| xla-mir-203 | MI0038291 | None | chr8S | 10634938 | 10634997 | - | - |
| xla-mir-206 | MI0038292 | None | chr5L | 152010995 | 152011054 | + | - |
| xla-mir-20a | MI0038293 | None | chr2L | 107332044 | 107332104 | - | - |
| xla-mir-210 | MI0038294 | None | chr4L | 22477271 | 22477333 | - | - |
| xla-mir-212 | MI0038295 | None | chr2L | 33469356 | 33469423 | + | - |
| xla-mir-214-1 | MI0038296 | None | chr4S | 70705205 | 70705265 | + | - |
| xla-mir-214-2 | MI0038297 | None | chr4L | 98250428 | 98250488 | + | - |
| xla-mir-216 | MI0038298 | None | chr5L | 33680985 | 33681046 | + | - |
| xla-mir-217 | MI0038299 | None | chr5S | 27733495 | 27733551 | + | - |
| xla-mir-22 | MI0038300 | None | chr2S | 33069168 | 33069231 | - | - |
| xla-mir-221 | MI0038301 | None | chr2S | 44258709 | 44258770 | + | - |
| xla-mir-222 | MI0038302 | None | chr2S | 44258250 | 44258309 | + | - |
| xla-mir-23a-2 | MI0038303 | None | chr4S | 54382914 | 54382973 | - | - |
| xla-mir-23b | MI0038304 | None | chr1S | 117534196 | 117534254 | + | - |
| xla-mir-24a-2 | MI0038305 | None | chr1L | 125599057 | 125599115 | + | - |
| xla-mir-24a-1 | MI0038306 | None | chr1S | 117534864 | 117534926 | + | - |
| xla-mir-24b-2 | MI0038307 | None | chr3S | 119620229 | 119620283 | + | - |
| xla-mir-25 | MI0038308 | None | chr3S | 121108998 | 121109057 | + | - |
| xla-mir-26-1 | MI0038309 | None | chr2L | 127916786 | 127916846 | - | - |
| xla-mir-26-2 | MI0038310 | None | chr9_10L | 53616646 | 53616706 | - | - |
| xla-mir-27a | MI0038311 | None | chr3L | 127494213 | 127494272 | + | - |
| xla-mir-27b | MI0038312 | None | chr1L | 125598599 | 125598663 | + | - |
| xla-mir-29b | MI0038313 | None | chr2L | 47230337 | 47230402 | + | - |
| xla-mir-29c | MI0038314 | None | chr2S | 40460714 | 40460774 | + | - |
| xla-mir-301-1 | MI0038315 | None | chr2S | 65501318 | 65501376 | + | - |
| xla-mir-301-2 | MI0038316 | None | chr2L | 78129147 | 78129207 | + | - |
| xla-mir-30a | MI0038317 | None | chr5S | 75827308 | 75827369 | + | - |
| xla-mir-30b | MI0038318 | None | chr6S | 114135222 | 114135281 | - | - |
| xla-mir-30c | MI0038319 | None | chr2S | 58346625 | 58346685 | + | - |
| xla-mir-30d | MI0038320 | None | chr6L | 116315785 | 116315847 | - | - |
| xla-mir-30e | MI0038321 | None | chr2L | 70619191 | 70619254 | + | - |
| xla-mir-338 | MI0038322 | None | chr9_10S | 91668157 | 91668216 | - | - |
| xla-mir-33a | MI0038323 | None | chr9_10S | 101833429 | 101833488 | - | - |
| xla-mir-33b | MI0038324 | None | chr4L | 112398303 | 112398363 | + | - |
| xla-mir-34a | MI0038325 | None | chr7S | 66468447 | 66468510 | - | - |
| xla-mir-34b | MI0038326 | None | chr7S | 61650543 | 61650603 | + | - |
| xla-mir-363-2 | MI0038327 | None | chr8S | 74307464 | 74307528 | - | - |
| xla-mir-375 | MI0038328 | None | chr9_10L | 53094726 | 53094785 | + | - |
| xla-mir-425-1 | MI0038329 | None | Sc000019_chr1S | 10989928 | 10989990 | + | - |
| xla-mir-425-2 | MI0038330 | None | chr4S | 99611500 | 99611562 | - | - |
| xla-mir-427-2 | MI0038331 | None | chr3S | 121605218 | 121605281 | - | - |
| xla-mir-428a-2 | MI0038332 | None | chr8S | 26130373 | 26130433 | + | - |
| xla-mir-428b | MI0038333 | None | chr8L | 529335 | 529392 | + | - |
| xla-mir-429-2 | MI0038334 | None | chr7S | 64719969 | 64720027 | - | - |
| xla-mir-449 | MI0038335 | None | chr1S | 170602158 | 170602218 | + | - |
| xla-mir-455 | MI0038336 | None | chr8S | 35001702 | 35001759 | - | - |
| xla-mir-499 | MI0038337 | None | chr9_10S | 32979789 | 32979849 | + | - |
| xla-mir-92a-3 | MI0038338 | None | chr8S | 74307587 | 74307654 | - | - |
| xla-mir-92a-4 | MI0038339 | None | chr2S | 91488294 | 91488353 | - | - |
| xla-mir-92b | MI0038340 | None | Sc000103_chrNA | 303236 | 303296 | + | - |
| xla-mir-93 | MI0038341 | None | chr3L | 129601896 | 129601956 | + | - |
| xla-mir-96 | MI0038342 | None | chr3S | 59901148 | 59901211 | - | - |
| xla-mir-98 | MI0038343 | None | chr8S | 36774667 | 36774745 | - | - |
| xla-mir-99 | MI0038344 | None | chr2S | 9125857 | 9125915 | - | - |