Accession
MI0038231
Description
Xenopus laevis
xla-mir-106-1 precursor miRNA
Sequence
13023
reads,
454.0
reads per million, 18 experiments
AAAAGUGCUUAUAGUGCAGGuagaacuuagaccuACUGCACAGUAAGCACUUCCUG
..((((((((((.((((((.(((.........))))))))).))))))))))....
..((((((((((.((((((.(((.........))))))))).))))))))))....
Structure
--AA A G aac
AAGUGCUUAU GUGCAG uag u
|||||||||| |||||| ||| u
UUCACGAAUG CACGUC Auc a
GUCC A - cag
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr8L: 48822350-48822405 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from xla-mir-106-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature xla-miR-106-1-5p
| Accession | MIMAT0046418 |
| Description | Xenopus laevis xla-miR-106-1-5p mature miRNA |
| Sequence | 1 - AAAAGUGCUUAUAGUGCAGG - 20 |
| Evidence |
experimental
Illumina [1] |
Mature xla-miR-106-1-3p
| Accession | MIMAT0046419 |
| Description | Xenopus laevis xla-miR-106-1-3p mature miRNA |
| Sequence | 35 - ACUGCACAGUAAGCACUUCCUG - 56 |
| Evidence |
experimental
Illumina [1] |
References
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