Stem-loop xla-mir-301-2

Accession

MI0038316

Description

Xenopus laevis xla-mir-301-2 precursor miRNA

Literature search

1 open access papers mention xla-mir-301-2
(1 sentences)

Sequence

GCUCUGACUUUAUUGCACUACUguacuauacagcuagCAGUGCAAUAGUAUUGUCAAAGca
(((.((((.((((((((((.((((........)).)).))))))))))....)))).))).

Structure

-   C    ---U          A  -  acu 
 GCU UGAC    UUAUUGCACU CU gu   a
 ||| ||||    |||||||||| || ||    
 cGA ACUG    GAUAACGUGA ga cg   u
a   A    UUAU          C  u  aca 

Annotation confidence Not enough data

Genome context

chr2L: 78129147-78129207 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-301-2

Mature xla-miR-301-5p

• Accession: MIMAT0046566
• Description: Xenopus laevis xla-miR-301-5p mature miRNA
• Sequence: 1 - GCUCUGACUUUAUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-301-3p

• Accession: MIMAT0046567
• Description: Xenopus laevis xla-miR-301-3p mature miRNA
• Sequence: 38 - CAGUGCAAUAGUAUUGUCAAAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38