Stem-loop xla-mir-216

Accession

MI0038298

Description

Xenopus laevis xla-mir-216 precursor miRNA

Sequence

UAAUCUCAGCUGGCAACUGUGAGcgguuaauaaauuaucuCACAGUGGUCUCUGGGAUUAUG
(((((((((..(((.((((((((.((((....))))..)))))))).))).)))))))))..

Structure

--         CU   A        -c    a 
  UAAUCUCAG  GGC ACUGUGAG  gguu a
  |||||||||  ||| ||||||||  ||||  
  AUUAGGGUC  CUG UGACACuc  uuaa u
GU         -U   G        ua    a 

Annotation confidence Low

Genome context

chr5L: 33680985-33681046 [+]

Mature xla-miR-216-5p

• Accession: MIMAT0046536
• Description: Xenopus laevis xla-miR-216-5p mature miRNA
• Sequence: 1 - UAAUCUCAGCUGGCAACUGUGAG - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-216-3p

• Accession: MIMAT0046537
• Description: Xenopus laevis xla-miR-216-3p mature miRNA
• Sequence: 41 - CACAGUGGUCUCUGGGAUUAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38