Stem-loop xla-let-7e

Accession

MI0038222

Description

Xenopus laevis xla-let-7e precursor miRNA

Literature search

2 open access papers mention xla-let-7e
(2 sentences)

Sequence

UGAGGUAGUAGGUUGUUUAGUUguggguugcaccccgacauuuggagaaCUAUACAAUCUACUGUCUUUCC
.(((((((((((((((.(((((.(((((...))))..........).))))).)))))))))))))))...

Structure

--U               U     g ----------    u 
   GAGGUAGUAGGUUGU UAGUU u          gggu  
   ||||||||||||||| ||||| |          |||| g
   UUCUGUCAUCUAACA AUCaa a          ccca  
CCU               U     g gguuuacagc    c 

Annotation confidence Low

Genome context

Sc000231_chrNA: 497-567 [-]

Mature xla-let-7e-5p

• Accession: MIMAT0046401
• Description: Xenopus laevis xla-let-7e-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGGUUGUUUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-let-7e-3p

• Accession: MIMAT0046402
• Description: Xenopus laevis xla-let-7e-3p mature miRNA
• Sequence: 50 - CUAUACAAUCUACUGUCUUUCC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38