Stem-loop xla-mir-34b-1

Accession

MI0038326

Description

Xenopus laevis xla-mir-34b-1 precursor miRNA

Literature search

1 open access papers mention xla-mir-34b-1
(1 sentences)

Sequence

5173 reads, 194.0 reads per million, 17 experiments

AGGCAGUGUAGUUAGCUGAUUGUguuauaucaaaugugcAAUCACUAACUAAACUGCCAUC
.((((((.(((((((.(((((((..(((.....))).)))))))))))))).))))))...

Structure

--A      G       C       gu   a 
   GGCAGU UAGUUAG UGAUUGU  uau u
   |||||| ||||||| |||||||  ||| c
   CCGUCA AUCAAUC ACUAAcg  gua a
CUA      A       -       -u   a 

Annotation confidence High

Genome context

chr7S: 61650543-61650603 [+]

Mature xla-miR-34b-5p

• Accession: MIMAT0046586
• Description: Xenopus laevis xla-miR-34b-5p mature miRNA
• Sequence: 1 - AGGCAGUGUAGUUAGCUGAUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-34b-1-3p

• Accession: MIMAT0046587
• Description: Xenopus laevis xla-miR-34b-1-3p mature miRNA
• Sequence: 40 - AAUCACUAACUAAACUGCCAUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38