Stem-loop xla-mir-144

Accession

MI0038255

Description

Xenopus laevis xla-mir-144 precursor miRNA

Literature search

1 open access papers mention xla-mir-144
(2 sentences)

Sequence

10812 reads, 383.0 reads per million, 17 experiments

GGAUAUCAUCAUAUACUGUAAGUuuguuuuaagacacUACAGUAUAGAUGAUGUACUa
((((((((((.(((((((((.((((......))))..))))))))))))))))).)).

Structure

-  -        A         -A    gu 
 GG AUAUCAUC UAUACUGUA  GUuu  u
 || |||||||| |||||||||  ||||   
 UC UGUAGUAG AUAUGACAU  caga  u
a  A        -         ca    au 

Annotation confidence High

Genome context

chr2S: 4306708-4306765 [-]

Mature xla-miR-144-5p

• Accession: MIMAT0046458
• Description: Xenopus laevis xla-miR-144-5p mature miRNA
• Sequence: 1 - GGAUAUCAUCAUAUACUGUAAGU - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-144-3p

• Accession: MIMAT0046459
• Description: Xenopus laevis xla-miR-144-3p mature miRNA
• Sequence: 38 - UACAGUAUAGAUGAUGUACU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38