Stem-loop xla-mir-148a-1

Accession

MI0038259

Description

Xenopus laevis xla-mir-148a-1 precursor miRNA

Literature search

3 open access papers mention xla-mir-148a-1
(5 sentences)

Sequence

1240951 reads, 39725.0 reads per million, 18 experiments

cAAAGUUCUGUGACACUUCGACUcugaauuugauagcagUCAGUGCACUACAGAACUUUGUU
((((((((((((.((((..(((((((.......))).))))))))...))))))))))))..

Structure

--            --A    UC    -   aa 
  cAAAGUUCUGUG   CACU  GACU cug  u
  ||||||||||||   ||||  |||| |||  u
  GUUUCAAGACAU   GUGA  CUga gau  u
UU            CAC    --    c   ag 

Annotation confidence High

Genome context

chr6L: 36438750-36438811 [-]

Mature xla-miR-148a-1-5p

• Accession: MIMAT0046466
• Description: Xenopus laevis xla-miR-148a-1-5p mature miRNA
• Sequence: 2 - AAAGUUCUGUGACACUUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-148a-1-3p

• Accession: MIMAT0046467
• Description: Xenopus laevis xla-miR-148a-1-3p mature miRNA
• Sequence: 40 - UCAGUGCACUACAGAACUUUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38