Stem-loop xla-mir-148a

Accession

MI0038259

Description

Xenopus laevis xla-mir-148a precursor miRNA

Literature search

1 open access papers mention xla-mir-148a
(3 sentences)

Sequence

CAAAGUUCUGUGACACUUCGACUcugaauuugauagcagUCAGUGCACUACAGAACUUUGUU
((((((((((((.((((..(((((((.......))).))))))))...))))))))))))..

Structure

--            --A    UC    -   aa 
  CAAAGUUCUGUG   CACU  GACU cug  u
  ||||||||||||   ||||  |||| |||  u
  GUUUCAAGACAU   GUGA  CUga gau  u
UU            CAC    --    c   ag 

Annotation confidence Not enough data

Genome context

chr6L: 36438750-36438811 [-]

Mature xla-miR-148a-5p

• Accession: MIMAT0046466
• Description: Xenopus laevis xla-miR-148a-5p mature miRNA
• Sequence: 1 - CAAAGUUCUGUGACACUUCGACU - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-148a-3p

• Accession: MIMAT0046467
• Description: Xenopus laevis xla-miR-148a-3p mature miRNA
• Sequence: 40 - UCAGUGCACUACAGAACUUUGUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38