Stem-loop xla-mir-22

Accession

MI0038300

Description

Xenopus laevis xla-mir-22 precursor miRNA

Literature search

1 open access papers mention xla-mir-22
(4 sentences)

Sequence

CAGUUCUUCAGUGGCAAGCUUUAuguuguucuucugugcuaAAGCUGCCAGUUGAAGAACUGUU
((((((((((((((((.((((((.((...........))))))))))))).)))))))))))..

Structure

--           -     A      u  uguu 
  CAGUUCUUCAG UGGCA GCUUUA gu    c
  ||||||||||| ||||| |||||| ||    u
  GUCAAGAAGUU ACCGU CGAAau cg    u
UU           G     -      -  uguc 

Annotation confidence Not enough data

Genome context

chr2S: 33069168-33069231 [-]

Mature xla-miR-22-5p

• Accession: MIMAT0046540
• Description: Xenopus laevis xla-miR-22-5p mature miRNA
• Sequence: 1 - CAGUUCUUCAGUGGCAAGCUUUA - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-22-3p

• Accession: MIMAT0046541
• Description: Xenopus laevis xla-miR-22-3p mature miRNA
• Sequence: 42 - AAGCUGCCAGUUGAAGAACUGUU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38