Stem-loop xla-mir-107

Accession

MI0038232

Description

Xenopus laevis xla-mir-107 precursor miRNA

Literature search

1 open access papers mention xla-mir-107
(1 sentences)

Sequence

AGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAU
((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))..

Structure

--    U  U           C   u   a 
  AGCU CU UACAGUGUUGC UUG ggc u
  |||| || ||||||||||| ||| ||| g
  UCGG GA AUGUUACGACG Aac uug g
UA    -  C           -   -   a 

Annotation confidence Low

Genome context

chr7S: 24233759-24233816 [+]

Mature xla-miR-107-5p

• Accession: MIMAT0046420
• Description: Xenopus laevis xla-miR-107-5p mature miRNA
• Sequence: 1 - AGCUUCUUUACAGUGUUGCCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-107-3p

• Accession: MIMAT0046421
• Description: Xenopus laevis xla-miR-107-3p mature miRNA
• Sequence: 38 - AGCAGCAUUGUACAGGGCUAU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38