Stem-loop xla-mir-140-2

Accession

MI0038252

Description

Xenopus laevis xla-mir-140-2 precursor miRNA

Sequence

55752 reads, 1993.0 reads per million, 18 experiments

cCAGUGGUUUUACCCUAUGGUAGguuacgucaggcuguucuACCACAGGGUAGAACCACGGAC
((.(((((((((((((.(((((((.(((.....).)).))))))).)))))))))))))))..

Structure

--  A             A       u  - g 
  cC GUGGUUUUACCCU UGGUAGg ua c u
  || ||||||||||||| ||||||| || | c
  GG CACCAAGAUGGGA ACCAucu gu g a
CA  -             C       u  c g 

Annotation confidence High

Genome context

Sc000039_chrNA: 150696-150758 [-]

Mature xla-miR-140-5p

• Accession: MIMAT0046452
• Description: Xenopus laevis xla-miR-140-5p mature miRNA
• Sequence: 2 - CAGUGGUUUUACCCUAUGGUAG - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-140-3p

• Accession: MIMAT0046453
• Description: Xenopus laevis xla-miR-140-3p mature miRNA
• Sequence: 42 - ACCACAGGGUAGAACCACGGAC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38