Stem-loop xla-mir-142-2

Accession

MI0038253

Description

Xenopus laevis xla-mir-142-2 precursor miRNA

Sequence

3300 reads, 763.0 reads per million, 18 experiments

CAUAAAGUAGAAAGCACUACUagacagcacugaacgcUGUAGUGUUUCCUACUUUAUGGA
((((((((((.(((((((.....(((((.......)))))))))))).))))))))))..

Structure

--          A       ACUag     ac 
  CAUAAAGUAG AAGCACU     acagc  u
  |||||||||| |||||||     |||||  g
  GUAUUUCAUC UUUGUGA     UGUcg  a
AG          C       -----     ca 

Annotation confidence Medium

Genome context

chr2S: 31372004-31372063 [+]

Mature xla-miR-142-2-5p

• Accession: MIMAT0046454
• Description: Xenopus laevis xla-miR-142-2-5p mature miRNA
• Sequence: 1 - CAUAAAGUAGAAAGCACUACU - 21
• Evidence: experimental ; Illumina [1]

Mature xla-miR-142-3p

• Accession: MIMAT0046455
• Description: Xenopus laevis xla-miR-142-3p mature miRNA
• Sequence: 38 - UGUAGUGUUUCCUACUUUAUGGA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38