Stem-loop xla-mir-427b-1

Accession

MI0038331

Description

Xenopus laevis xla-mir-427b-1 precursor miRNA

Sequence

1931418 reads, 110961.0 reads per million, 14 experiments

ACCCAAAACAGGGCUCUCUCUUGugacugaauuaugaugggAAAGUGCUUUCUGUUUUGGGCGU
.(((((((((((((.((.((((((.(........).)))))).)).)))..))))))))))...

Structure

--A          --   U  C      g cug 
   CCCAAAACAG  GGC CU UCUUGu a   a
   ||||||||||  ||| || |||||| |    
   GGGUUUUGUC  UCG GA Agggua u   a
UGC          UU   U  A      g auu 

Annotation confidence High

Genome context

chr3S: 121605218-121605281 [-]

Mature xla-miR427b-5p

• Accession: MIMAT0061196
• Description: Xenopus laevis xla-miR427b-5p mature miRNA
• Sequence: 1 - ACCCAAAACAGGGCUCUCUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature xla-miR-427b-1-3p

• Accession: MIMAT0046596
• Description: Xenopus laevis xla-miR-427b-1-3p mature miRNA
• Sequence: 42 - AAAGUGCUUUCUGUUUUGGGCGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38