Stem-loop xla-mir-182-2

Accession

MI0038273

Description

Xenopus laevis xla-mir-182-2 precursor miRNA

Literature search

1 open access papers mention xla-mir-182-2
(128 sentences)

Sequence

264070 reads, 30040.0 reads per million, 18 experiments

UUUGGCAAUGGUAGAACUCACACUggugagcuauguagauccgGUGGUUCUAGACUUGCCAACU
.(((((((...((((((...((((((....((....))..))))))))))))...)))))))..

Structure

-U       UGG      UCA      ugag  a 
  UUGGCAA   UAGAAC   CACUgg    cu u
  |||||||   ||||||   ||||||    ||  
  AACCGUU   AUCUUG   GUGgcc    ga g
UC       CAG      ---      --ua  u 

Annotation confidence High

Genome context

chr3L: 71343446-71343509 [+]

Mature xla-miR-182-5p

• Accession: MIMAT0046490
• Description: Xenopus laevis xla-miR-182-5p mature miRNA
• Sequence: 1 - UUUGGCAAUGGUAGAACUCACACU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-182-3p

• Accession: MIMAT0046491
• Description: Xenopus laevis xla-miR-182-3p mature miRNA
• Sequence: 44 - GUGGUUCUAGACUUGCCAACU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38