Stem-loop xla-mir-122

Accession

MI0038235

Description

Xenopus laevis xla-mir-122 precursor miRNA

Literature search

2 open access papers mention xla-mir-122
(3 sentences)

Sequence

UGGAGUGUGACAAUGGUGUUUgugucagagcuaucaaACGCCAUUAUCACACUAAUGA
...(((((((.(((((((((((............))))))))))).))))))).....

Structure

--UGG       C           uguca 
     AGUGUGA AAUGGUGUUUg     g
     ||||||| |||||||||||      
     UCACACU UUACCGCAaac     a
AGUAA       A           uaucg 

Annotation confidence Not enough data

Genome context

chr1S: 179834556-179834613 [-]

Mature xla-miR-122-5p

• Accession: MIMAT0046426
• Description: Xenopus laevis xla-miR-122-5p mature miRNA
• Sequence: 1 - UGGAGUGUGACAAUGGUGUUU - 21
• Evidence: experimental ; Illumina [1]

Mature xla-miR-122-3p

• Accession: MIMAT0046427
• Description: Xenopus laevis xla-miR-122-3p mature miRNA
• Sequence: 38 - ACGCCAUUAUCACACUAAUGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38