Stem-loop xla-mir-425-1

Accession

MI0038329

Description

Xenopus laevis xla-mir-425-1 precursor miRNA

Sequence

AAUGACACGAUCACUCCCGUUGAGccgaaacacauagcgCCAUCGGGAAUAUCGUGUCGCUCC
...((((((((...(((((.((.(((..........).)))).)))))..)))))))).....

Structure

--AAU        CAC     U  A  - gaaa 
     GACACGAU   UCCCG UG Gc c    c
     ||||||||   ||||| || || |     
     CUGUGCUA   AGGGC AC Cg g    a
CCUCG        -UA     U  -  c auac 

Annotation confidence Not enough data

Genome context

Sc000019_chr1S: 10989928-10989990 [+]

Mature xla-miR-425-5p

• Accession: MIMAT0046592
• Description: Xenopus laevis xla-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGUUGAG - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-425-3p

• Accession: MIMAT0046593
• Description: Xenopus laevis xla-miR-425-3p mature miRNA
• Sequence: 40 - CCAUCGGGAAUAUCGUGUCGCUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38