Stem-loop xla-mir-30d

Accession

MI0038320

Description

Xenopus laevis xla-mir-30d precursor miRNA

Literature search

1 open access papers mention xla-mir-30d
(1 sentences)

Sequence

UGUAAACAUCCCCGACUGGAAGCUgugaggcugcaccuuagCUUUCAGUCUGGUGUUUGCUGC
.(((((((((...(((((((((((..((((.....))))))))))))))).)))))))))...

Structure

--U         CCC           gu    c 
   GUAAACAUC   GACUGGAAGCU  gagg u
   |||||||||   |||||||||||  |||| g
   CGUUUGUGG   CUGACUUUCga  uucc c
CGU         --U           --    a 

Annotation confidence Low

Genome context

chr6L: 116315785-116315847 [-]

Mature xla-miR-30d-5p

• Accession: MIMAT0046574
• Description: Xenopus laevis xla-miR-30d-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCCCGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-30d-3p

• Accession: MIMAT0046575
• Description: Xenopus laevis xla-miR-30d-3p mature miRNA
• Sequence: 42 - CUUUCAGUCUGGUGUUUGCUGC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38