Stem-loop xla-mir-428a-2

Accession

MI0038332

Description

Xenopus laevis xla-mir-428a-2 precursor miRNA

Sequence

328929 reads, 10723.0 reads per million, 17 experiments

ucGGCCAAACUGGGGCGCUGCCacuguagcuuggggUAAGUGCUCUCUAGUUCGGUUGCUg
.(((((.(((((((((((((((.(((.....)))))).))))).).)))))).)))))...

Structure

--u     A      - -     -   a   u 
   cGGCC AACUGG G GCGCU GCC cug a
   ||||| |||||| | ||||| ||| ||| g
   GUUGG UUGAUC C CGUGA Ugg ggu c
gUC     C      U U     A   -   u 

Annotation confidence High

Genome context

chr8S: 26130373-26130433 [+]

Mature xla-miR-428a-5p

• Accession: MIMAT0046597
• Description: Xenopus laevis xla-miR-428a-5p mature miRNA
• Sequence: 3 - GGCCAAACUGGGGCGCUGCC - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-428a-3p

• Accession: MIMAT0046598
• Description: Xenopus laevis xla-miR-428a-3p mature miRNA
• Sequence: 37 - UAAGUGCUCUCUAGUUCGGUUGCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38