Stem-loop xla-mir-34a-1

Accession

MI0038325

Description

Xenopus laevis xla-mir-34a-1 precursor miRNA

Literature search

6 open access papers mention xla-mir-34a-1
(9 sentences)

Sequence

2804 reads, 99.0 reads per million, 17 experiments

UGGCAGUGUCUUAGCUGGUUGUUGuggaacauuagaaguagCAAUCAGCAAAUAUACUGCCCUa
.((((((((.((.(((((((((((..............))))))))))).)).))))))))...

Structure

--U        C  A           uggaac 
   GGCAGUGU UU GCUGGUUGUUG      a
   |||||||| || |||||||||||       
   CCGUCAUA AA CGACUAACgau      u
aUC        U  A           gaagau 

Annotation confidence High

Genome context

chr7S: 66468447-66468510 [-]

Mature xla-miR-34a-5p

• Accession: MIMAT0046584
• Description: Xenopus laevis xla-miR-34a-5p mature miRNA
• Sequence: 1 - UGGCAGUGUCUUAGCUGGUUGUUG - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-34a-3p

• Accession: MIMAT0046585
• Description: Xenopus laevis xla-miR-34a-3p mature miRNA
• Sequence: 42 - CAAUCAGCAAAUAUACUGCCCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38