Stem-loop xla-mir-29c

Accession

MI0038314

Description

Xenopus laevis xla-mir-29c precursor miRNA

Sequence

ACCGAUCUCUCUUGGUGUUCAGaggcucaggucuucaucUAGCACCAUUUGAAAUCGGUUA
((((((.((...(((((((..(((((....))))).....)))))))...)).))))))..

Structure

--      C  UCU       ---CA     u 
  ACCGAU UC   UGGUGUU     Gaggc c
  |||||| ||   |||||||     |||||  
  UGGCUA AG   ACCACGA     uucug a
AU      A  UUU       Ucuac     g 

Annotation confidence Low

Genome context

chr2S: 40460714-40460774 [+]

Mature xla-miR-29c-5p

• Accession: MIMAT0046564
• Description: Xenopus laevis xla-miR-29c-5p mature miRNA
• Sequence: 1 - ACCGAUCUCUCUUGGUGUUCAG - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-29c-3p

• Accession: MIMAT0046565
• Description: Xenopus laevis xla-miR-29c-3p mature miRNA
• Sequence: 40 - UAGCACCAUUUGAAAUCGGUUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38