Stem-loop xla-mir-214-1

Accession

MI0038296

Description

Xenopus laevis xla-mir-214-1 precursor miRNA

Sequence

GCCUGUCUACACUUGCUGUGCagaacauccucucaccuguACAGCAGGCACAGACAGGCAG
((((((((...((((((((((((.............))))))))))))...))))))))..

Structure

--        ACA            aacau 
  GCCUGUCU   CUUGCUGUGCag     c
  ||||||||   ||||||||||||     c
  CGGACAGA   GGACGACAuguc     u
GA        CAC            cacuc 

Annotation confidence Low

Genome context

chr4S: 70705205-70705265 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-214-1

Mature xla-miR-214-5p

• Accession: MIMAT0046534
• Description: Xenopus laevis xla-miR-214-5p mature miRNA
• Sequence: 1 - GCCUGUCUACACUUGCUGUGC - 21
• Evidence: experimental ; Illumina [1]

Mature xla-miR-214-3p

• Accession: MIMAT0046535
• Description: Xenopus laevis xla-miR-214-3p mature miRNA
• Sequence: 41 - ACAGCAGGCACAGACAGGCAG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38