Stem-loop xla-mir-130b

Accession

MI0038245

Description

Xenopus laevis xla-mir-130b precursor miRNA

Literature search

1 open access papers mention xla-mir-130b
(3 sentences)

Sequence

ACUCUUUCCCUGUUGCACUACUgugccagugaauaaagCAGUGCAAUGAUGAAAGGGCAU
.(((((((..(((((((((.((..............)).)))))))))..)))))))...

Structure

--A       CC         A  gugcca 
   CUCUUUC  UGUUGCACU CU      g
   |||||||  ||||||||| ||       
   GGGAAAG  GUAACGUGA ga      u
UAC       UA         C  aauaag 

Annotation confidence Not enough data

Genome context

chr1S: 133539761-133539820 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-130b

Mature xla-miR-130b-5p

• Accession: MIMAT0046443
• Description: Xenopus laevis xla-miR-130b-5p mature miRNA
• Sequence: 1 - ACUCUUUCCCUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-130b-3p

• Accession: MIMAT0046444
• Description: Xenopus laevis xla-miR-130b-3p mature miRNA
• Sequence: 39 - CAGUGCAAUGAUGAAAGGGCAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38