Stem-loop xla-mir-191

Accession

MI0038279

Description

Xenopus laevis xla-mir-191 precursor miRNA

Literature search

2 open access papers mention xla-mir-191
(2 sentences)

Sequence

10585 reads, 2597.0 reads per million, 18 experiments

CAACGGAAUCCCAAAAGCAGCUGUuguggaaauguucagcUGCAGUUGGGACCCGUUCAC
.(((((..((((((..(((((((.............)))))))..)))))).)))))...

Structure

--C     AA      AA       Uugug 
   AACGG  UCCCAA  GCAGCUG     g
   |||||  ||||||  |||||||     a
   UUGCC  AGGGUU  CGUcgac     a
CAC     -C      GA       uugua 

Annotation confidence High

Genome context

chr4S: 99615962-99616021 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-191

Mature xla-miR-191-5p

• Accession: MIMAT0046502
• Description: Xenopus laevis xla-miR-191-5p mature miRNA
• Sequence: 1 - CAACGGAAUCCCAAAAGCAGCUGU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-191-3p

• Accession: MIMAT0046503
• Description: Xenopus laevis xla-miR-191-3p mature miRNA
• Sequence: 41 - UGCAGUUGGGACCCGUUCAC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38