Stem-loop xla-mir-425-2

Accession

MI0038330

Description

Xenopus laevis xla-mir-425-2 precursor miRNA

Sequence

AAUGACACGAUCACUCCCGUUGAGccgaaacacacagugcCAUCGGGAAUAUCGUGUCGCUCC
...((((((((...(((((.((.(((..........).)))).)))))..)))))))).....

Structure

--AAU        CAC     U  A  - gaaa 
     GACACGAU   UCCCG UG Gc c    c
     ||||||||   ||||| || || |     
     CUGUGCUA   AGGGC AC cg g    a
CCUCG        -UA     U  -  u acac 

Annotation confidence Not enough data

Genome context

chr4S: 99611500-99611562 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-425-2

Mature xla-miR-425-5p

• Accession: MIMAT0046592
• Description: Xenopus laevis xla-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGUUGAG - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-425-2-3p

• Accession: MIMAT0046594
• Description: Xenopus laevis xla-miR-425-2-3p mature miRNA
• Sequence: 41 - CAUCGGGAAUAUCGUGUCGCUCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38