miRBase entry: xla-mir-92a-3

Stem-loop xla-mir-92a-3

Accession

MI0038338

Description

Xenopus laevis xla-mir-92a-3 precursor miRNA

Literature search

2 open access papers mention xla-mir-92a-3
(2 sentences)

Sequence

UAUGGGUGGGGAUUUGUUGCACGACUuguguuuuuauuaaaagUAUUGCACUUGUCCCGGCCUGUgga
(((((((.(((((..((.(((..((((.............))))..)))))..))))).)))))))..

Structure

--       G     UU  U   CG    guguu 
  UAUGGGU GGGAU  GU GCA  ACUu     u
  ||||||| |||||  || |||  ||||     u
  gUGUCCG CCCUG  CA CGU  Ugaa     u
ag       G     UU  -   UA    aauua

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr8S: 74307587-74307654 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from xla-mir-92a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature xla-miR-92a-3p

Accession	MIMAT0011149
Description	Xenopus laevis xla-miR-92a-3p mature miRNA
Sequence	44 - UAUUGCACUUGUCCCGGCCUGU - 65
Evidence	not_experimental

Mature xla-miR-92a-5p

Accession	MIMAT0046609
Description	Xenopus laevis xla-miR-92a-5p mature miRNA
Sequence	1 - UAUGGGUGGGGAUUUGUUGCACGACU - 26
Evidence	experimental Illumina [1]

References

PubMed ID: 26548531
Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
"Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
"Dev Biol (2016) 409:26-38