Stem-loop xla-mir-10b-1

Accession

MI0038234

Description

Xenopus laevis xla-mir-10b-1 precursor miRNA

Literature search

4 open access papers mention xla-mir-10b-1
(10 sentences)

Sequence

29113 reads, 1447.0 reads per million, 18 experiments

UACCCUGUAGAACCGAAUUUGUgugguuuuaacauagucaCAGAUUCGAUUCUAGGGGGAUa
..((((.(((((.((((((((((...............)))))))))).))))).))))...

Structure

-UA    G     C          ugguuu 
   CCCU UAGAA CGAAUUUGUg      u
   |||| ||||| ||||||||||      a
   GGGG AUCUU GCUUAGACac      a
aUA    G     A          ugauac 

Annotation confidence Medium

Genome context

chr9_10L: 68713580-68713641 [-]

Mature xla-miR-10b-5p

• Accession: MIMAT0046424
• Description: Xenopus laevis xla-miR-10b-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAACCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-10b-3p

• Accession: MIMAT0046425
• Description: Xenopus laevis xla-miR-10b-3p mature miRNA
• Sequence: 41 - CAGAUUCGAUUCUAGGGGGAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38