Stem-loop xla-mir-33a-1

Accession

MI0038323

Description

Xenopus laevis xla-mir-33a-1 precursor miRNA

Literature search

1 open access papers mention xla-mir-33a-1
(1 sentences)

Sequence

2039 reads, 70.0 reads per million, 18 experiments

GUGCAUUGUAGUUGCAUUGCaugugauaucggugaugugCAAUGUGCCUGCAGUGCAACA
.((((((((((.((((((((((((.((....)).)))))))))))).))))))))))...

Structure

--G          U            g  a 
   UGCAUUGUAG UGCAUUGCaugu au u
   |||||||||| |||||||||||| ||  
   ACGUGACGUC GUGUAACgugua ug c
ACA          C            g  g 

Annotation confidence High

Genome context

chr9_10S: 101833429-101833488 [-]

Mature xla-miR-33a-5p

• Accession: MIMAT0046580
• Description: Xenopus laevis xla-miR-33a-5p mature miRNA
• Sequence: 1 - GUGCAUUGUAGUUGCAUUGC - 20
• Evidence: experimental ; Illumina [1]

Mature xla-miR-33a-1-3p

• Accession: MIMAT0046581
• Description: Xenopus laevis xla-miR-33a-1-3p mature miRNA
• Sequence: 40 - CAAUGUGCCUGCAGUGCAACA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38