Stem-loop xla-mir-222

Accession

MI0038302

Description

Xenopus laevis xla-mir-222 precursor miRNA

Sequence

GCUCAGUAAUCAGUGUAGAUCCuguauuucugucagcAGCUACAUCUGGCUACUGGGUCU
((((((((.(((((((((...(((.((....)))))...))))).)))).))))))))..

Structure

--        A    -     AUC   u  u 
  GCUCAGUA UCAG UGUAG   Cug au u
  |||||||| |||| |||||   ||| ||  
  UGGGUCAU GGUC ACAUC   gac ug c
UC        C    U     GAc   -  u 

Annotation confidence Not enough data

Genome context

chr2S: 44258250-44258309 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-222

Mature xla-miR-222-5p

• Accession: MIMAT0046544
• Description: Xenopus laevis xla-miR-222-5p mature miRNA
• Sequence: 1 - GCUCAGUAAUCAGUGUAGAUCC - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-222-3p

• Accession: MIMAT0046545
• Description: Xenopus laevis xla-miR-222-3p mature miRNA
• Sequence: 38 - AGCUACAUCUGGCUACUGGGUCU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38