Stem-loop xla-mir-92a-4

Accession

MI0038339

Description

Xenopus laevis xla-mir-92a-4 precursor miRNA

Literature search

2 open access papers mention xla-mir-92a-4
(2 sentences)

Sequence

AGGUUGGGAUUGGUUGCAAUGCUguccuauuuauguagUAUUGCACUUGUCCCGGCCUGU
((((((((((.(((.(((((((((.(........))))))))))))).))))))))))..

Structure

--          U   U         u cua 
  AGGUUGGGAU GGU GCAAUGCUg c   u
  |||||||||| ||| ||||||||| |    
  UCCGGCCCUG UCA CGUUAUgau g   u
UG          U   -         - uau 

Annotation confidence Low

Genome context

chr2S: 91488294-91488353 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from xla-mir-92a-4

Mature xla-miR-92a-3p

• Accession: MIMAT0011149
• Description: Xenopus laevis xla-miR-92a-3p mature miRNA
• Sequence: 39 - UAUUGCACUUGUCCCGGCCUGU - 60
• Evidence: not_experimental

Mature xla-miR-92a-4-5p

• Accession: MIMAT0046610
• Description: Xenopus laevis xla-miR-92a-4-5p mature miRNA
• Sequence: 1 - AGGUUGGGAUUGGUUGCAAUGCU - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38