Stem-loop xla-mir-148b

Accession

MI0038260

Description

Xenopus laevis xla-mir-148b precursor miRNA

Literature search

1 open access papers mention xla-mir-148b
(4 sentences)

Sequence

UGAAGUUCUGUUUUACACUCCGGCUgugaguaaguggaagUCAGUGCAUCACAGAACUUUGUC
.((((((((((..(.((((..((((.............)))))))).)..))))))))))...

Structure

--U          UU A    CC    gugag 
   GAAGUUCUGU  U CACU  GGCU     u
   ||||||||||  | ||||  ||||     a
   UUUCAAGACA  A GUGA  CUga     a
CUG          CU C    --    aggug 

Annotation confidence Low

Genome context

chr2L: 132006903-132006965 [-]

Mature xla-miR-148b-5p

• Accession: MIMAT0046468
• Description: Xenopus laevis xla-miR-148b-5p mature miRNA
• Sequence: 1 - UGAAGUUCUGUUUUACACUCCGGCU - 25
• Evidence: experimental ; Illumina [1]

Mature xla-miR-148b-3p

• Accession: MIMAT0046469
• Description: Xenopus laevis xla-miR-148b-3p mature miRNA
• Sequence: 41 - UCAGUGCAUCACAGAACUUUGUC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38