Stem-loop xla-mir-23b

Accession

MI0038304

Description

Xenopus laevis xla-mir-23b precursor miRNA

Sequence

UGGGUUCCUGGCAUGCUGAUUugugaguuaagauuaaaAUCACAUUGCCAGGGAUUACC
..(((((((((((((.((((((..............)))))))).)))))))))))...

Structure

-UG           -  C      gugagu 
   GGUUCCUGGCA UG UGAUUu      u
   ||||||||||| || ||||||       
   UUAGGGACCGU AC ACUAaa      a
CCA           U  -      auuaga 

Annotation confidence Not enough data

Genome context

chr1S: 117534196-117534254 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-23b

Mature xla-miR-23b-5p

• Accession: MIMAT0046548
• Description: Xenopus laevis xla-miR-23b-5p mature miRNA
• Sequence: 1 - UGGGUUCCUGGCAUGCUGAUU - 21
• Evidence: experimental ; Illumina [1]

Mature xla-miR-23b-3p

• Accession: MIMAT0046549
• Description: Xenopus laevis xla-miR-23b-3p mature miRNA
• Sequence: 39 - AUCACAUUGCCAGGGAUUACC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38