Stem-loop xla-let-7i

Accession

MI0038225

Description

Xenopus laevis xla-let-7i precursor miRNA

Literature search

4 open access papers mention xla-let-7i
(33 sentences)

Sequence

481084 reads, 11459.0 reads per million, 18 experiments

UGAGGUAGUAGUUUGUGCUGUUggucggguugugacacugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCU
.(((((((((((((((((.(((((.(((((.((...)).)))))))........))).)))))))))))))))))...

Structure

--U                 U   --------  u     u  g 
   GAGGUAGUAGUUUGUGC GUU        gg cgggu gu  
   ||||||||||||||||| |||        || ||||| || a
   UUCCGUCAUCGAACGCG Caa        uc gcccg ca  
UCG                 U   uagaggug  -     u  c 

Annotation confidence High

Genome context

chr3S: 89483139-89483216 [+]

Mature xla-let-7i-5p

• Accession: MIMAT0046407
• Description: Xenopus laevis xla-let-7i-5p mature miRNA
• Sequence: 1 - UGAGGUAGUAGUUUGUGCUGUU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-let-7i-3p

• Accession: MIMAT0046408
• Description: Xenopus laevis xla-let-7i-3p mature miRNA
• Sequence: 57 - CUGCGCAAGCUACUGCCUUGCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38