Stem-loop xla-mir-16b

Accession

MI0038264

Description

Xenopus laevis xla-mir-16b precursor miRNA

Literature search

1 open access papers mention xla-mir-16b
(3 sentences)

Sequence

UAGCAGCACGUAAAUAUUGGGUgauaugauauggagccCCAGUAUUAUUGUGCUGCUUAA
.(((((((((..((((((((((..(((...)))..).)))))))))..)))))))))...

Structure

--U         UA         - ga   g 
   AGCAGCACG  AAUAUUGGG U  uau  
   |||||||||  ||||||||| |  ||| a
   UCGUCGUGU  UUAUGACCc g  gua  
AAU         UA         c ag   u 

Annotation confidence Not enough data

Genome context

chr5L: 113026888-113026947 [-]

Mature xla-miR-16b-5p

• Accession: MIMAT0046476
• Description: Xenopus laevis xla-miR-16b-5p mature miRNA
• Sequence: 1 - UAGCAGCACGUAAAUAUUGGGU - 22
• Evidence: experimental ; Illumina [1]

Mature xla-miR-16b-3p

• Accession: MIMAT0046477
• Description: Xenopus laevis xla-miR-16b-3p mature miRNA
• Sequence: 39 - CCAGUAUUAUUGUGCUGCUUAA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38