miRBase entry: xla-mir-146a

Stem-loop xla-mir-146a


Accession
MI0038257
Description
Xenopus laevis xla-mir-146a precursor miRNA


Sequence

UGAGAACUGAAUUCCAUAGGUuguuagggguuagacCUAUGGUGCUUAGUUCCAUA
((.(((((((...(((((((((...........)))))))))...)))))))))..

Structure
--  A       AUU         guua 
  UG GAACUGA   CCAUAGGUu    g
  || |||||||   |||||||||    g
  AC CUUGAUU   GGUAUCcag    g
AU  -       CGU         auug 


Annotation confidence Not enough data
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Genome context
chr3L: 4894402-4894457 [-]

Database links

Mature xla-miR-146a-5p

Accession MIMAT0046462
Description Xenopus laevis xla-miR-146a-5p mature miRNA
Sequence 1 - UGAGAACUGAAUUCCAUAGGU - 21
Evidence experimental
Illumina [1]

Mature xla-miR-146a-3p

Accession MIMAT0046463
Description Xenopus laevis xla-miR-146a-3p mature miRNA
Sequence 37 - CUAUGGUGCUUAGUUCCAUA - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26548531
    Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
    "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
    "Dev Biol (2016) 409:26-38