Stem-loop xla-mir-30e-1

Accession

MI0038321

Description

Xenopus laevis xla-mir-30e-1 precursor miRNA

Sequence

316868 reads, 10839.0 reads per million, 18 experiments

UGUAAACAUCCUUGACUGGAAGCUgugaaauaauguaaguagCUUUCAGUCGGAUUUUUACAGC
((((((.((((..((((((((((((..............)))))))))))))))).))))))..

Structure

--      C    UU            ugaaau 
  UGUAAA AUCC  GACUGGAAGCUg      a
  |||||| ||||  ||||||||||||       
  ACAUUU UAGG  CUGACUUUCgau      a
CG      U    --            gaaugu 

Annotation confidence High

Genome context

chr2L: 70619191-70619254 [+]

Mature xla-miR-30e-1-5p

• Accession: MIMAT0046576
• Description: Xenopus laevis xla-miR-30e-1-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUUGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-30e-1-3p

• Accession: MIMAT0046577
• Description: Xenopus laevis xla-miR-30e-1-3p mature miRNA
• Sequence: 43 - CUUUCAGUCGGAUUUUUACAGC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38