Stem-loop xla-mir-99

Accession

MI0038344

Description

Xenopus laevis xla-mir-99 precursor miRNA

Sequence

AACCCGUAGAUCCGAUCUUGUggugaauuccuuugcucAAGCUCGUUUCUAUGGGUCUG
.(((((((((..(((.((((.((((((....)))))))))).)))..)))))))))...

Structure

--A         UC   U    U      u 
   ACCCGUAGA  CGA CUUG ggugaa u
   |||||||||  ||| |||| ||||||  
   UGGGUAUCU  GCU GAAc ucguuu c
GUC         UU   C    -      c 

Annotation confidence Not enough data

Genome context

chr2S: 9125857-9125915 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from xla-mir-99

Mature xla-miR-99-5p

• Accession: MIMAT0046619
• Description: Xenopus laevis xla-miR-99-5p mature miRNA
• Sequence: 1 - AACCCGUAGAUCCGAUCUUGU - 21
• Evidence: experimental ; Illumina [1]

Mature xla-miR-99-3p

• Accession: MIMAT0046620
• Description: Xenopus laevis xla-miR-99-3p mature miRNA
• Sequence: 39 - AAGCUCGUUUCUAUGGGUCUG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38