Stem-loop xla-mir-30a

Accession

MI0038317

Description

Xenopus laevis xla-mir-30a precursor miRNA

Literature search

1 open access papers mention xla-mir-30a
(2 sentences)

Sequence

UGUAAACAUCCUCGACUGGAAGCUgugaacaguugaagggCUUUCAGUCAGAUGUUUGCAGC
((((((((((...(((((((((((.(..........).))))))))))).))))))))))..

Structure

--          CUC           g gaac 
  UGUAAACAUC   GACUGGAAGCU u    a
  ||||||||||   ||||||||||| |     
  ACGUUUGUAG   CUGACUUUCgg a    g
CG          --A           g aguu 

Annotation confidence Low

Genome context

chr5S: 75827308-75827369 [+]

Mature xla-miR-30a-5p

• Accession: MIMAT0046568
• Description: Xenopus laevis xla-miR-30a-5p mature miRNA
• Sequence: 1 - UGUAAACAUCCUCGACUGGAAGCU - 24
• Evidence: experimental ; Illumina [1]

Mature xla-miR-30a-3p

• Accession: MIMAT0046569
• Description: Xenopus laevis xla-miR-30a-3p mature miRNA
• Sequence: 41 - CUUUCAGUCAGAUGUUUGCAGC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26548531
   Identification of microRNAs and microRNA targets in Xenopus gastrulae: The role of miR-26 in the regulation of Smad1
   "Liu C, Lou CH, Shah V, Ritter R, Talley J, Soibam B, Benham A, Zhu H, Perez E, Shieh YE, Gunaratne PH, Sater AK"
   "Dev Biol (2016) 409:26-38